STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF67447.1Transposase; Psort location: Cytoplasmic, score: 8.87. (476 aa)    
Predicted Functional Partners:
EEF69598.1
Histidinol phosphate phosphatase HisJ family; KEGG: oih:OB0554 2.3e-45 histidinol phosphatase K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily.
  
  
  0.698
EEF67989.1
RNA methyltransferase, RsmD family; KEGG: sab:SAB0988 9.1e-35 probable methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
  
    0.678
EEF69431.1
Hypothetical protein; KEGG: cpf:CPF_1229 2.3e-22 histidinol phosphate phosphatase family protein K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily.
     
  0.660
EEF68908.1
KEGG: cpf:CPF_1229 3.6e-33 histidinol phosphate phosphatase family protein K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily.
     
  0.660
EEF68046.1
PHP domain protein; KEGG: vfi:VFA0065 8.3e-41 DNA polymerase beta K04477; Psort location: Cytoplasmic, score: 8.87.
     
  0.660
EEF67862.1
Histidinol phosphate phosphatase HisJ family; KEGG: tte:TTE2610 1.0e-26 his2.2; histidinol phosphatase and related hydrolases of the PHP family K04486; Psort location: Cytoplasmic, score: 8.87.
     
  0.660
EEF65745.1
KEGG: cpf:CPF_1229 2.9e-38 histidinol phosphate phosphatase family protein K04486; Psort location: Cytoplasmic, score: 8.87; Belongs to the PHP hydrolase family. HisK subfamily.
     
  0.660
EEF69522.1
DNA-binding helix-turn-helix protein; KEGG: bxe:Bxe_C0924 7.1e-05 transcriptional regulator, XRE family with shikimate kinase activity K00891; Psort location: Cytoplasmic, score: 8.87.
  
   
 0.580
EEF68572.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.528
EEF66481.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.