STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67394.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (235 aa)    
Predicted Functional Partners:
EEF67396.1
Hypothetical protein.
       0.792
EEF67398.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.792
EEF67397.1
CHC2 zinc finger domain protein; KEGG: dde:Dde_2053 4.1e-10 DNA primase K02316; Psort location: Cytoplasmic, score: 8.87.
       0.779
EEF67395.1
DNA topoisomerase; KEGG: efa:EF2312 2.4e-208 topB-2; DNA topoisomerase III K03169; Psort location: Cytoplasmic, score: 8.87.
       0.778
EEF67399.1
Helicase C-terminal domain protein; KEGG: chu:CHU_1468 4.5e-11 dpn; possible adenine-specific DNA methylase K00599; Psort location: Extracellular, score: 7.50.
       0.679
EEF67400.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.679
EEF67401.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.679
EEF67392.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.526
EEF67393.1
Hypothetical protein.
       0.522
EEF67388.1
Tat pathway signal sequence domain protein.
       0.424
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.