STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67401.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (112 aa)    
Predicted Functional Partners:
srfAA
Surfactin synthetase, subunit 1; KEGG: xac:XAC3922 4.3e-57 entF; ATP-dependent serine activating enzyme K02364; Psort location: Cytoplasmic, score: 9.98.
   
 0.957
EEF67400.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.953
EEF67399.1
Helicase C-terminal domain protein; KEGG: chu:CHU_1468 4.5e-11 dpn; possible adenine-specific DNA methylase K00599; Psort location: Extracellular, score: 7.50.
 
   
 0.941
EEF67397.1
CHC2 zinc finger domain protein; KEGG: dde:Dde_2053 4.1e-10 DNA primase K02316; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.935
EEF67398.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.929
EEF69574.1
Hypothetical protein; KEGG: ctc:CTC01847 3.2e-09 fumarate reductase flavoprotein subunit K00244.
  
 0.907
EEF68637.1
Flavocytochrome c; KEGG: lpl:lp_3491 1.3e-92 fumarate reductase, flavoprotein subunit precursor K00244.
  
 0.907
EEF68512.1
FMN-binding domain protein; KEGG: lpl:lp_0055 2.6e-14 fumarate reductase, flavoprotein subunit precursor K00238.
  
 0.906
EEF67755.1
FAD binding domain protein; KEGG: lpl:lp_0055 2.0e-119 fumarate reductase, flavoprotein subunit precursor K00238; Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.906
EEF67827.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.905
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.