STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67404.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (284 aa)    
Predicted Functional Partners:
EEF67403.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.958
EEF66651.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.823
EEF67405.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.795
EEF67406.1
Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.698
EEF67402.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.547
EEF67399.1
Helicase C-terminal domain protein; KEGG: chu:CHU_1468 4.5e-11 dpn; possible adenine-specific DNA methylase K00599; Psort location: Extracellular, score: 7.50.
     
 0.438
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.