STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67405.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (108 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.934
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
  
 
  0.818
EEF68426.1
KEGG: ttj:TTHA1104 1.1e-47 prephenate dehydratase K04518; Psort location: Cytoplasmic, score: 9.98.
    
 0.812
EEF67672.1
KEGG: cpe:CPE0698 7.6e-15 chorismate mutase K04516; Psort location: Cytoplasmic, score: 8.87.
    
 0.812
EEF67403.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.795
EEF67404.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.795
EEF66087.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; KEGG: hpj:jhp1037 2.0e-48 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169; Psort location: Cytoplasmic, score: 8.87.
    
 0.790
EEF66068.1
Hypothetical protein; KEGG: mja:MJ0266 1.4e-47 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170; Psort location: Cytoplasmic, score: 8.87.
    
 0.790
EEF67056.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: vfi:VF0184 8.0e-123 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase K01726; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.765
EEF67062.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: ava:Ava_0899 1.5e-64 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K00811; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.765
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.