STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF67436.1Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 8.87. (185 aa)    
Predicted Functional Partners:
EEF67437.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.782
EEF67427.1
Hypothetical protein.
 
     0.754
EEF67434.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.697
EEF67435.1
Toxin-antitoxin system, antitoxin component, Xre family; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.691
pcrA
KEGG: chy:CHY_1099 1.6e-133 pcrA; ATP-dependent DNA helicase PcrA K03657; Psort location: Cytoplasmic, score: 8.87.
    
  0.683
EEF67416.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.614
EEF67424.1
Tetratricopeptide repeat protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.561
EEF67644.1
KEGG: psp:PSPPH_2917 2.5e-07 DNA-binding protein K00517; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.492
EEF66539.1
Hypothetical protein.
 
   
 0.479
EEF67408.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.438
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.