STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67363.1KEGG: bur:Bcep18194_A6491 2.5e-57 ABC amino acid transporter, periplasmic ligand binding protein K02030; Belongs to the bacterial solute-binding protein 3 family. (269 aa)    
Predicted Functional Partners:
EEF67361.1
KEGG: smu:SMU.936 5.1e-73 putative amino acid ABC transporter, ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
EEF67362.1
KEGG: hpa:HPAG1_0922 5.5e-44 amino acid ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
EEF68230.1
ABC transporter, permease protein; KEGG: bja:blr4464 1.1e-24 probable ABC transporter ATP-binding/permease protein K02028:K02029; Psort location: CytoplasmicMembrane, score: 9.99.
 0.998
EEF69357.1
ABC transporter, ATP-binding protein; KEGG: tte:TTE0514 7.1e-83 glnQ; ABC-type polar amino acid transport system, ATPase component K02028; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.979
EEF68231.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE1326 9.4e-49 probable amino acid ABC transporter K02028; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.976
EEF69356.1
KEGG: sma:SAV6546 1.8e-30 putative ABC transporter permease K02028; Psort location: CytoplasmicMembrane, score: 9.99.
0.926
EEF69305.1
PAS domain S-box protein; KEGG: ret:RHE_PF00222 5.0e-08 probable two-component sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.87.
   
 0.857
EEF69295.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.6e-75 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
   
 0.857
EEF69297.1
PAS domain S-box protein; KEGG: mag:amb1110 1.1e-64 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
   
 0.857
EEF68653.1
Hypothetical protein.
   
 0.851
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.