STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67302.1KEGG: shn:Shewana3_3435 4.4e-15 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
EEF69562.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 5.9e-24 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.775
EEF67304.1
KEGG: shn:Shewana3_3435 1.3e-19 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.775
EEF66807.1
KEGG: shn:Shewana3_3435 3.0e-05 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.775
EEF66930.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.5e-13 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.774
EEF69171.1
KEGG: shn:Shewana3_3435 1.2e-06 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.773
EEF65768.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 2.2e-11 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family.
  
     0.773
EEF65850.1
KEGG: shn:Shewana3_3435 3.0e-10 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 8.87; Belongs to the LysR transcriptional regulatory family.
  
     0.771
EEF66975.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 4.0e-18 transcriptional regulator, LysR family K06022; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.761
EEF67529.1
LysR substrate binding domain protein; Psort location: Cytoplasmic, score: 9.98; Belongs to the LysR transcriptional regulatory family.
  
     0.757
EEF68601.1
KEGG: shn:Shewana3_3435 0.0047 transcriptional regulator, LysR family K06022; Belongs to the LysR transcriptional regulatory family.
  
     0.748
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.