STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67274.1MBOAT family protein; KEGG: hne:HNE_2072 9.1e-67 algI; alginate biosynthesis protein AlgI K00680; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family. (461 aa)    
Predicted Functional Partners:
EEF68233.1
KEGG: hpa:HPAG1_0538 1.3e-05 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.924
EEF67750.1
KEGG: hpa:HPAG1_0538 2.0e-07 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.924
EEF67275.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
 
    0.850
srfAA
Surfactin synthetase, subunit 1; KEGG: xac:XAC3922 4.3e-57 entF; ATP-dependent serine activating enzyme K02364; Psort location: Cytoplasmic, score: 9.98.
  
  
 0.819
EEF67272.1
KEGG: cyb:CYB_0649 1.4e-30 dolichyl-phosphate-mannose-protein mannosyltransferase K00728; Psort location: CytoplasmicMembrane, score: 9.97.
   
   0.750
EEF67273.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
     
 0.745
EEF68045.1
Beta-lactamase; KEGG: bcz:BCZK2916 1.2e-55 pbp; penicillin-binding protein K01467; Psort location: Extracellular, score: 8.10.
  
  
 0.715
EEF67572.1
Beta-lactamase; KEGG: bcz:BCZK2916 1.3e-113 pbp; penicillin-binding protein K01467; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
 0.704
EEF65813.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
     0.694
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.681
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.