STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67148.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (329 aa)    
Predicted Functional Partners:
EEF66064.1
Methyltransferase domain protein; KEGG: cvi:CV0170 2.9e-54 probable methyl transferase K00599; Psort location: Cytoplasmic, score: 8.87.
    
  0.703
EEF69569.1
Methyltransferase domain protein; KEGG: lpl:lp_1533 2.3e-15 methyltransferase (putative) K00599; Psort location: Cytoplasmic, score: 8.87.
     
 0.697
EEF68776.1
Methyltransferase domain protein; KEGG: noc:Noc_2926 3.1e-11 UbiE/COQ5 methyltransferase K05929.
     
 0.697
EEF67829.1
Methyltransferase domain protein; KEGG: pen:PSEEN1484 4.2e-08 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568.
     
 0.697
EEF67347.1
Methyltransferase domain protein; KEGG: mav:MAV_4317 1.6e-09 putative methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
     
 0.697
EEF66873.1
Methyltransferase domain protein; KEGG: sfr:Sfri_1692 9.7e-47 rRNA (guanine-N(1)-)-methyltransferase K00563; Psort location: Cytoplasmic, score: 8.87.
     
 0.697
EEF66749.1
Methyltransferase domain protein; KEGG: mav:MAV_4317 2.3e-15 putative methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
     
 0.697
EEF66484.1
Methyltransferase domain protein; KEGG: btl:BALH_2512 3.5e-07 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
     
 0.697
EEF66400.1
Putative rRNA methylase; KEGG: spb:M28_Spy0305 1.9e-25 SAM-dependent methyltransferase.
     
 0.697
EEF67147.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.631
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.