STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67000.1HAMP domain protein; KEGG: gka:GK1912 3.4e-40 two-component sensor histidine kinase K07718; Psort location: Cytoplasmic, score: 8.87. (588 aa)    
Predicted Functional Partners:
EEF67001.1
Response regulator receiver domain protein; KEGG: bur:Bcep18194_B2520 2.8e-14 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.975
EEF67718.1
LytTr DNA-binding domain protein; KEGG: rru:Rru_A0376 6.7e-06 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.963
EEF69036.1
Response regulator receiver domain protein; KEGG: chu:CHU_2785 2.1e-07 rcsC; sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.960
EEF65989.1
Response regulator receiver domain protein; KEGG: aci:ACIAD0627 1.2e-07 baeR; transcriptional regulator protein (OmpR family),response regulator in two-component regulatory system with BaeS, regulates RNA synthesis K07664; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.960
EEF68820.1
Response regulator receiver domain protein; KEGG: aci:ACIAD0627 3.3e-14 baeR; transcriptional regulator protein (OmpR family),response regulator in two-component regulatory system with BaeS, regulates RNA synthesis K07664; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.959
EEF68923.1
Response regulator receiver domain protein; KEGG: mth:MTH1607 2.3e-07 sensory transduction regulatory protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.953
EEF67611.1
Response regulator receiver domain protein; KEGG: pha:PSHAa0913 5.1e-06 chemotaxis protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.933
EEF69346.1
Response regulator receiver domain protein; KEGG: rru:Rru_A0376 8.5e-16 transcriptional regulator, LytR/AlgR family K07705; Psort location: Cytoplasmic, score: 9.98.
 
 0.929
EEF66784.1
LytTr DNA-binding domain protein; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.910
EEF68505.1
Response regulator receiver domain protein; KEGG: ava:Ava_2028 6.7e-16 two component transcriptional regulator, LuxR family; Psort location: Cytoplasmic, score: 9.98.
 
 0.900
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.