STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF67030.1Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 8.87. (144 aa)    
Predicted Functional Partners:
EEF69779.1
Hypothetical protein; KEGG: lac:LBA1707 7.8e-20 beta-glucoside permease K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF69780.1
Phosphotransferase system, EIIB; KEGG: spr:spr0505 1.5e-48 PTS-EII; phosphotransferase system sugar-specific EII component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF69031.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_0905 1.0e-65 pts12BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF68853.1
Phosphotransferase system, EIIC; KEGG: lpl:lp_0905 1.1e-84 pts12BCA; beta-glucosides PTS, EIIBCA K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF68786.1
Phosphotransferase system, EIIC; KEGG: bli:BL00213 4.3e-92 bglPB; phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF68764.1
Phosphotransferase system, EIIC; KEGG: lwe:lwe0269 1.9e-112 PTS system, beta-glucoside-specific IIABC component K00890; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF68599.1
Phosphotransferase system, EIIC; KEGG: bld:BLi00748 1.3e-104 close homolog to BglP PTS enzyme IIBCA component; RBL02795 K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
EEF68300.1
PTS system, beta-glucoside-specific, IIABC component; KEGG: bld:BLi00748 5.2e-174 close homolog to BglP PTS enzyme IIBCA component; RBL02795 K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
ptbA-6
PTS system, glucose subfamily, IIA component; KEGG: bsu:BG10934 2.4e-27 bglP, sytA, n17C; PTS beta-glucoside-specific enzyme IIBCA component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.803
EEF68210.1
Phosphotransferase system, EIIC; KEGG: eca:ECA0860 8.9e-92 PTS system, IIabc component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.803
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.