STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66968.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (311 aa)    
Predicted Functional Partners:
EEF66969.1
Von Willebrand factor type A domain protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.906
EEF67528.1
KEGG: gsu:GSU0794 1.3e-90 pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein K00359; Psort location: Cytoplasmic, score: 9.98.
  
 0.801
EEF66503.1
Macro domain protein; KEGG: bur:Bcep18194_A6181 5.3e-39 Appr-1-p processing enzyme family K00985; Psort location: Cytoplasmic, score: 8.87.
 
      0.742
prs
Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 
  0.700
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.666
EEF66096.1
TIGR02687 family protein; Psort location: Cytoplasmic, score: 8.87.
    
  0.666
EEF66714.1
SNF2 family N-terminal domain protein; KEGG: lwe:lwe1660 5.8e-120 DNA/RNA helicase protein K01529; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.616
EEF66107.1
SNF2 family N-terminal domain protein; KEGG: cal:orf19.5367 1.4e-34 RDH54; helicase required for mitotic diploid-specific recombination and repair K01509; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.615
EEF69474.1
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; KEGG: gka:GK3297 5.2e-151 phosphomannomutase K01840; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.597
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
  0.597
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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