STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66636.1KEGG: tte:TTE2424 4.2e-05 amiC2; N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.87. (434 aa)    
Predicted Functional Partners:
EEF66813.1
KEGG: bce:BC0896 2.4e-20 S-layer protein / peptidoglycan endo-beta-N-acetylglucosaminidase K01238.
  
 
 0.951
EEF67265.1
Glycosyl hydrolase family 25; KEGG: cpe:CPE0382 3.5e-15 probable autolytic lysozyme K07273; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.809
EEF68045.1
Beta-lactamase; KEGG: bcz:BCZK2916 1.2e-55 pbp; penicillin-binding protein K01467; Psort location: Extracellular, score: 8.10.
  
 
 0.805
EEF67866.1
KEGG: spd:SPD_1920 6.1e-23 peptidase, S54 (rhomboid) family protein; Psort location: CytoplasmicMembrane, score: 7.63.
  
 
 0.792
EEF68247.1
Putative peptidoglycan binding domain protein; KEGG: bcl:ABC1351 5.9e-06 xlyA; N-acetylmuramoyl-L-alanine amidase K01447; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.791
EEF68628.1
Transglycosylase; KEGG: bha:BH3812 3.5e-113 penicillin-binding protein K05366; Psort location: Extracellular, score: 9.55.
   
 0.779
EEF68192.1
Transglycosylase; KEGG: mmr:Mmar10_2868 2.1e-36 penicillin-binding protein, 1A family K05364; Psort location: Extracellular, score: 9.55.
   
 0.779
ponA
KEGG: gka:GK2168 1.5e-105 penicillin-binding protein 1A/1B (PBP1) (penicillin-insensitive transglycosylase (peptidoglycan TGase); penicillin-sensitive transpeptidase (DD-transpeptidase)) K05366; Psort location: Extracellular, score: 9.55.
   
 0.779
EEF66174.1
Hypothetical protein; KEGG: bha:BH1702 1.3e-22 ponA; penicillin-binding proteins 1A/1B (penicillin-insensitive transglycosylase / penicillin-sensitive transpeptidase) K05366; Psort location: Extracellular, score: 9.55.
   
 0.779
EEF66175.1
Transglycosylase; KEGG: bcz:BCZK1431 4.6e-72 penicillin-binding protein; Psort location: Extracellular, score: 9.55.
   
 0.779
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.