STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66546.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
EEF66545.1
Hypothetical protein.
     
 0.815
EEF66544.1
Hypothetical protein.
       0.795
EEF66640.1
Hypothetical protein; KEGG: pfa:PFL1435c 0.0019 myosin d K01553.
    
 0.754
EEF65877.1
Putative flagellar protein FliS; KEGG: azo:azo2482 1.9e-89 putative hybrid sensor and regulator; Psort location: CytoplasmicMembrane, score: 7.84.
    
 0.733
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.731
EEF65926.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tcx:Tcr_2180 5.2e-64 PAS/PAC sensor hybrid histidine kinase K07679; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.728
EEF69305.1
PAS domain S-box protein; KEGG: ret:RHE_PF00222 5.0e-08 probable two-component sensor histidine kinase protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.727
EEF69295.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: syn:slr2104 3.6e-75 hik22; two-component hybrid histidine kinase K02486; Psort location: CytoplasmicMembrane, score: 9.49.
    
 0.727
EEF69297.1
PAS domain S-box protein; KEGG: mag:amb1110 1.1e-64 signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.49.
    
 0.727
EEF66173.1
KEGG: cyb:CYB_1515 4.6e-15 tetratricopeptide repeat/protein kinase domain protein K08884; Psort location: Cytoplasmic, score: 8.87.
    
 0.727
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.