STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66422.1Ser/Thr phosphatase family protein; KEGG: hpa:HPAG1_0403 4.2e-16 integral membrane protein; Psort location: CytoplasmicMembrane, score: 7.63. (362 aa)    
Predicted Functional Partners:
EEF68913.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01818 2.0e-46 resE; sensor protein ResE; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.639
EEF65697.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ctc:CTC01918 2.3e-54 resE; sensor protein ResE; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.639
EEF69716.1
Ser/Thr phosphatase family protein; KEGG: bce:BC2476 2.2e-31 phosphoesterase; Psort location: Cytoplasmic, score: 8.87.
  
     0.625
EEF66424.1
Putative phage prohead protease, HK97 family; KEGG: bce:BC1828 1.2e-82 Xaa-Pro aminopeptidase K01262; Psort location: Cytoplasmic, score: 8.87.
       0.505
EEF68237.1
AMP-binding enzyme; KEGG: mav:MAV_3056 2.0e-126 linear gramicidin synthetase subunit D; Psort location: Cytoplasmic, score: 9.96.
 
  
 0.500
EEF66423.1
Beta-eliminating lyase; KEGG: tte:TTE0267 8.3e-89 gly1; Threonine aldolase K01620; Psort location: Cytoplasmic, score: 8.87.
       0.484
EEF66425.1
Peptidase, S9A/B/C family, catalytic domain protein; KEGG: fnu:FN1128 4.2e-156 acylamino-acid-releasing enzyme K01303.
       0.484
srfAA
Surfactin synthetase, subunit 1; KEGG: xac:XAC3922 4.3e-57 entF; ATP-dependent serine activating enzyme K02364; Psort location: Cytoplasmic, score: 9.98.
 
   
 0.457
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
   0.410
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.