Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EEF66399.1Hydrolase, NUDIX family; KEGG: ypa:YPA_1524 0.00049 putative pyrophosphohydrolase K08320; Psort location: Cytoplasmic, score: 8.87. (172 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; KEGG: tte:TTE0640 6.1e-61 nadE; NAD synthase K01950; Psort location: Cytoplasmic, score: 8.87; Belongs to the NAD synthetase family.
  
 
 0.799
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
    
 0.791
EEF66134.1
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
    
 0.782
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.765
EEF66396.1
Putative HAD hydrolase, TIGR01457 family; KEGG: fnu:FN0048 1.6e-55 4-nitrophenylphosphatase K01101; Psort location: Cytoplasmic, score: 8.87.
    
  0.763
EEF69761.1
KEGG: lin:lin1782 2.2e-05 hypothetical protein K08680; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.757
EEF68413.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: bpm:BURPS1710b_A1493 5.7e-20 GGDEF domain protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.754
EEF67023.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: wsu:WS0975 2.7e-25 cheA; hybrid histidine kinase K03407; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.754
rdgB
Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; KEGG: sab:SAB1015 7.7e-38 nucleoside triphosphatase K03341; Psort location: Cytoplasmic, score: 8.87; Belongs to the HAM1 NTPase family.
  
 
 0.745
EEF69116.1
Hydrolase, NUDIX family; KEGG: nmu:Nmul_A2233 7.2e-35 NUDIX hydrolase K01515; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.743
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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