STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF66386.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (291 aa)    
Predicted Functional Partners:
EEF67246.1
N-terminal ig-like domain of cellulase; KEGG: sus:Acid_2606 4.4e-83 cellulase K01179.
  
 0.914
EEF65813.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
  
  0.874
EEF66346.1
Collagen triple helix repeat protein; KEGG: gga:418942 2.2e-25 LOC418942; similar to Mitochondrial intermediate peptidase K01410.
  
 0.826
EEF67667.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.801
EEF67257.1
TIGR02677 family protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.801
EEF66348.1
Putative protein BclA; KEGG: gga:418942 1.2e-21 LOC418942; similar to Mitochondrial intermediate peptidase K01410.
  
 0.801
EEF68182.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tte:TTE0215 2.4e-105 bglX; Beta-glucosidase-related glycosidases K01207; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.790
EEF65814.1
MBOAT family protein; KEGG: pen:PSEEN4543 1.5e-89 algI; alginate O-acetylation protein AlgI K00680; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family.
 
  
  0.789
EEF66387.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.773
EEF67274.1
MBOAT family protein; KEGG: hne:HNE_2072 9.1e-67 algI; alginate biosynthesis protein AlgI K00680; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the membrane-bound acyltransferase family.
 
  
  0.760
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.