STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF66346.1Collagen triple helix repeat protein; KEGG: gga:418942 2.2e-25 LOC418942; similar to Mitochondrial intermediate peptidase K01410. (368 aa)    
Predicted Functional Partners:
EEF68780.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.916
EEF69498.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.906
EEF66393.1
Collagen triple helix repeat protein; KEGG: gga:418942 2.2e-17 LOC418942; similar to Mitochondrial intermediate peptidase K01410; Psort location: Extracellular, score: 8.82.
    
0.883
EEF69548.1
Kinase, PfkB family; KEGG: bha:BH1857 1.8e-61 fructokinase K00847; Psort location: Cytoplasmic, score: 9.98.
   
 0.836
EEF66386.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.826
EEF65912.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 0.818
EEF66349.1
Glycosyltransferase, group 2 family protein; KEGG: bcz:BCZK1105 7.2e-74 glycosyltransferase K00754; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.812
EEF69361.1
Hypothetical protein.
  
 0.801
EEF68045.1
Beta-lactamase; KEGG: bcz:BCZK2916 1.2e-55 pbp; penicillin-binding protein K01467; Psort location: Extracellular, score: 8.10.
    
 0.774
EEF65861.1
KEGG: cpf:CPF_0310 8.2e-137 putative glycolate oxidase, subunit GlcD K00104; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.764
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.