STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF66355.1Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00856 1.1e-68 glycosyltransferase K00754; Psort location: CytoplasmicMembrane, score: 10.00. (477 aa)    
Predicted Functional Partners:
EEF66353.1
Hypothetical protein.
     0.982
EEF66352.1
CotH protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.934
EEF67230.1
Polysaccharide deacetylase; KEGG: spr:spr1333 7.7e-38 pgdA; peptidoglycan GlcNAc deacetylase K01463; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.925
EEF69308.1
Response regulator receiver domain protein; KEGG: syn:slr2099 1.1e-16 hik40; two-component hybrid histidine kinase K02486; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.907
EEF69304.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: vfi:VF0494 6.6e-46 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.907
EEF68930.1
Polysaccharide deacetylase; KEGG: spr:spr1333 1.2e-42 pgdA; peptidoglycan GlcNAc deacetylase K01463; Psort location: Cytoplasmic, score: 9.65.
 
  
 0.902
EEF66351.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
   
 0.894
EEF67055.1
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein; KEGG: pfl:PFL_5097 3.2e-96 ilvB; acetolactate synthase II, large subunit K01652; Psort location: Cytoplasmic, score: 8.87; Belongs to the TPP enzyme family.
  
 0.884
EEF66173.1
KEGG: cyb:CYB_1515 4.6e-15 tetratricopeptide repeat/protein kinase domain protein K08884; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.868
EEF67584.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein; KEGG: vfi:VF0087 3.6e-38 sensory transduction protein kinase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.866
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.