STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF66356.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (290 aa)    
Predicted Functional Partners:
EEF66355.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00856 1.1e-68 glycosyltransferase K00754; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.831
EEF66353.1
Hypothetical protein.
     
 0.812
EEF66354.1
Putative phage DNA packaging protein; Psort location: Cytoplasmic, score: 8.87.
       0.810
EEF66352.1
CotH protein; Psort location: Cytoplasmic, score: 8.87.
     
 0.776
EEF67246.1
N-terminal ig-like domain of cellulase; KEGG: sus:Acid_2606 4.4e-83 cellulase K01179.
  
 
 0.735
EEF69548.1
Kinase, PfkB family; KEGG: bha:BH1857 1.8e-61 fructokinase K00847; Psort location: Cytoplasmic, score: 9.98.
    
 0.734
EEF69498.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
    
 0.734
EEF66351.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
       0.729
EEF68182.1
Glycosyl hydrolase family 3 N-terminal domain protein; KEGG: tte:TTE0215 2.4e-105 bglX; Beta-glucosidase-related glycosidases K01207; Psort location: Cytoplasmic, score: 9.98.
    
 0.720
EEF68948.1
Glycosyl hydrolase, family 88; KEGG: ret:RHE_PF00318 7.6e-118 putative glucoronyl hydrolase protein K01238; Psort location: Cytoplasmic, score: 8.87.
    
 0.719
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.