Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEF66297.1 | EEF66298.1 | HOLDEFILI_03564 | HOLDEFILI_03565 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.572 |
EEF66297.1 | EEF66299.1 | HOLDEFILI_03564 | HOLDEFILI_03566 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.795 |
EEF66297.1 | EEF66300.1 | HOLDEFILI_03564 | HOLDEFILI_03567 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.651 |
EEF66297.1 | EEF66301.1 | HOLDEFILI_03564 | HOLDEFILI_03568 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.651 |
EEF66297.1 | EEF66302.1 | HOLDEFILI_03564 | HOLDEFILI_03569 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Transcriptional regulator, effector binding domain protein; KEGG: eci:UTI89_C3737 1.8e-06 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 8.87. | 0.506 |
EEF66297.1 | EEF66303.1 | HOLDEFILI_03564 | HOLDEFILI_03570 | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | Beta-lactamase; KEGG: mma:MM3157 6.2e-36 putative 6-aminohexanoate-dimer hydrolase; Psort location: Cytoplasmic, score: 8.87. | 0.468 |
EEF66298.1 | EEF66297.1 | HOLDEFILI_03565 | HOLDEFILI_03564 | Hypothetical protein. | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | 0.572 |
EEF66298.1 | EEF66299.1 | HOLDEFILI_03565 | HOLDEFILI_03566 | Hypothetical protein. | Hypothetical protein. | 0.572 |
EEF66298.1 | EEF66300.1 | HOLDEFILI_03565 | HOLDEFILI_03567 | Hypothetical protein. | Hypothetical protein. | 0.489 |
EEF66298.1 | EEF66301.1 | HOLDEFILI_03565 | HOLDEFILI_03568 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.489 |
EEF66299.1 | EEF66297.1 | HOLDEFILI_03566 | HOLDEFILI_03564 | Hypothetical protein. | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | 0.795 |
EEF66299.1 | EEF66298.1 | HOLDEFILI_03566 | HOLDEFILI_03565 | Hypothetical protein. | Hypothetical protein. | 0.572 |
EEF66299.1 | EEF66300.1 | HOLDEFILI_03566 | HOLDEFILI_03567 | Hypothetical protein. | Hypothetical protein. | 0.651 |
EEF66299.1 | EEF66301.1 | HOLDEFILI_03566 | HOLDEFILI_03568 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.651 |
EEF66299.1 | EEF66302.1 | HOLDEFILI_03566 | HOLDEFILI_03569 | Hypothetical protein. | Transcriptional regulator, effector binding domain protein; KEGG: eci:UTI89_C3737 1.8e-06 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 8.87. | 0.505 |
EEF66299.1 | EEF66303.1 | HOLDEFILI_03566 | HOLDEFILI_03570 | Hypothetical protein. | Beta-lactamase; KEGG: mma:MM3157 6.2e-36 putative 6-aminohexanoate-dimer hydrolase; Psort location: Cytoplasmic, score: 8.87. | 0.468 |
EEF66300.1 | EEF66297.1 | HOLDEFILI_03567 | HOLDEFILI_03564 | Hypothetical protein. | Hypothetical protein; KEGG: mga:MGA_0106 0.0069 udk; uridine kinase K00876; Psort location: Cytoplasmic, score: 8.87. | 0.651 |
EEF66300.1 | EEF66298.1 | HOLDEFILI_03567 | HOLDEFILI_03565 | Hypothetical protein. | Hypothetical protein. | 0.489 |
EEF66300.1 | EEF66299.1 | HOLDEFILI_03567 | HOLDEFILI_03566 | Hypothetical protein. | Hypothetical protein. | 0.651 |
EEF66300.1 | EEF66301.1 | HOLDEFILI_03567 | HOLDEFILI_03568 | Hypothetical protein. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. | 0.773 |
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