STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66267.1Plasmid recombination enzyme; Psort location: Cytoplasmic, score: 8.87. (313 aa)    
Predicted Functional Partners:
EEF67226.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.947
EEF67197.1
4Fe-4S binding domain protein; KEGG: mja:MJ1166 7.4e-07 fwdF; formylmethanofuran dehydrogenase, subunit F (tungsten) K00205.
  
 
 0.926
EEF69758.1
Tat pathway signal sequence domain protein; KEGG: cno:NT01CX_0497 1.4e-05 pflC; pyruvate formate-lyase K00538.
  
 
 0.916
EEF66269.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
     0.906
EEF66939.1
KEGG: tde:TDE2512 2.4e-123 aldehyde dehydrogenase (NADP) family protein K00128; Psort location: Cytoplasmic, score: 9.98.
  
 0.893
EEF65834.1
KEGG: mhj:MHJ_0219 4.3e-115 putative methylmalonate-semialdehyde dehydrogenase K00140; Psort location: Cytoplasmic, score: 9.98.
  
 0.893
EEF67509.1
Bacterial transferase hexapeptide repeat protein; KEGG: lpl:lp_2861 4.9e-59 thgA3; galactoside O-acetyltransferase K00633; Psort location: Cytoplasmic, score: 9.98.
   
 0.886
EEF67063.1
WxcM-like protein.
   
 0.886
EEF66500.1
Bacterial transferase hexapeptide repeat protein; KEGG: eba:ebA2867 1.1e-47 maa; putative maltose O-acetyltransferase K00661; Psort location: Cytoplasmic, score: 9.65.
   
 0.886
EEF65833.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.886
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.