STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF66251.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.874
nadE
NAD+ synthase; KEGG: tte:TTE0640 6.1e-61 nadE; NAD synthase K01950; Psort location: Cytoplasmic, score: 8.87; Belongs to the NAD synthetase family.
    
 0.734
EEF66086.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: tma:TM0015 1.2e-20 pyruvate ferredoxin oxidoreductase, gamma subunit K00172; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.701
EEF66087.1
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein; KEGG: hpj:jhp1037 2.0e-48 porA; pyruvate ferredoxin oxidoreductase, alpha subunit K00169; Psort location: Cytoplasmic, score: 8.87.
    
 0.696
EEF66068.1
Hypothetical protein; KEGG: mja:MJ0266 1.4e-47 porB; pyruvate ferredoxin oxidoreductase, beta subunit K00170; Psort location: Cytoplasmic, score: 8.87.
    
 0.696
EEF68653.1
Hypothetical protein.
   
 0.688
EEF65946.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
   
 0.688
EEF66134.1
Competence/damage-inducible domain protein CinA; Belongs to the CinA family.
    
 0.667
EEF66173.1
KEGG: cyb:CYB_1515 4.6e-15 tetratricopeptide repeat/protein kinase domain protein K08884; Psort location: Cytoplasmic, score: 8.87.
   
 0.659
EEF66250.1
Hypothetical protein.
       0.645
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.