STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpA-2ATP synthase ab domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (587 aa)    
Predicted Functional Partners:
EEF66195.1
KEGG: ctc:CTC02332 2.5e-23 V-type sodium ATP synthase subunit C K02119; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
EEF66196.1
KEGG: ctc:CTC02331 2.0e-68 V-type sodium ATP synthase subunit I K02123; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
EEF66197.1
ATP synthase subunit C; KEGG: ctc:CTC02330 2.4e-18 putative V-type sodium ATP synthase subunit K K02124; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
EEF66198.1
KEGG: mja:MJ0218 5.1e-09 atpF; ATP synthase, subunit F K02122; Psort location: Cytoplasmic, score: 8.87.
 
 0.999
EEF66199.1
Hypothetical protein; KEGG: ctc:CTC02329 2.7e-05 putative V-type sodium ATP synthase subunit E K02121; Psort location: Cytoplasmic, score: 8.87.
  
 0.999
atpB-2
ATP synthase ab domain protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.999
atpD-2
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.997
EEF65651.1
CBS domain protein; KEGG: ctc:CTC01649 5.2e-103 putative manganese-dependent inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 8.87.
    
  0.924
EEF65785.1
Hypothetical protein.
   
 
 0.905
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.