STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66164.1Methyltransferase domain protein; KEGG: lsa:LSA1388 3.2e-23 putative methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87. (233 aa)    
Predicted Functional Partners:
EEF67952.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 1.0e-67 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.87.
    
 0.893
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
   
 0.870
EEF66161.1
RNA-binding protein, YhbY family; KEGG: gga:415776 0.0098 LOC415776; similar to MGC64570 protein K01271.
 
     0.861
yqeG
HAD phosphatase, family IIIA; KEGG: saa:SAUSA300_1557 4.5e-26 hydrolase, HAD-superfamily, subfamily IIIA K01112; Psort location: Cytoplasmic, score: 8.87.
 
     0.828
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
     
 0.819
EEF66160.1
Putative ribosome biogenesis GTPase YqeH; KEGG: gka:GK1177 0.00015 putative GTPase K06949; Psort location: Cytoplasmic, score: 8.87.
       0.795
mtnN-2
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
       0.795
EEF66166.1
SNARE-like domain protein; KEGG: lsl:LSL_1322 0.0020 alkaline phosphatase K01077; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEF69569.1
Methyltransferase domain protein; KEGG: lpl:lp_1533 2.3e-15 methyltransferase (putative) K00599; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.771
EEF67056.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; KEGG: vfi:VF0184 8.0e-123 CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase K01726; Psort location: Cytoplasmic, score: 8.87; Belongs to the DegT/DnrJ/EryC1 family.
    
  0.716
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.