STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66130.1DivIVA domain protein; KEGG: lwe:lwe2040 0.00017 cell division protein DivIVA K01549; Psort location: Cytoplasmic, score: 8.87. (109 aa)    
Predicted Functional Partners:
EEF67958.1
Putative septation ring formation regulator EzrA; KEGG: dre:317747 2.6e-08 rock2; rho-associated, coiled-coil containing protein kinase 2 K04514; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.948
EEF68087.1
Kinase domain protein; KEGG: lsa:LSA0692 1.8e-100 putative serine/threonine protein kinase K08884; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.937
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.842
ponA
KEGG: gka:GK2168 1.5e-105 penicillin-binding protein 1A/1B (PBP1) (penicillin-insensitive transglycosylase (peptidoglycan TGase); penicillin-sensitive transpeptidase (DD-transpeptidase)) K05366; Psort location: Extracellular, score: 9.55.
 
 
 
 0.841
pbpB
Penicillin-binding protein 2B; KEGG: tte:TTE1916 5.5e-44 ftsI4; Cell division protein FtsI/penicillin-binding protein 2 K03587; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.838
EEF66175.1
Transglycosylase; KEGG: bcz:BCZK1431 4.6e-72 penicillin-binding protein; Psort location: Extracellular, score: 9.55.
 
 
 
 0.836
EEF66174.1
Hypothetical protein; KEGG: bha:BH1702 1.3e-22 ponA; penicillin-binding proteins 1A/1B (penicillin-insensitive transglycosylase / penicillin-sensitive transpeptidase) K05366; Psort location: Extracellular, score: 9.55.
 
 
 
 0.827
EEF68114.1
PASTA domain protein; KEGG: bca:BCE_3904 0.00011 serine/threonine protein kinase K08884.
 
 
 0.798
EEF68151.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.796
EEF68628.1
Transglycosylase; KEGG: bha:BH3812 3.5e-113 penicillin-binding protein K05366; Psort location: Extracellular, score: 9.55.
   
 
 0.795
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.