STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66151.1Metallo-beta-lactamase domain protein; KEGG: pab:PAB0703 4.6e-07 hydroxyacylglutathione hydrolase related (glyoxalase ii) K01069; Psort location: Cytoplasmic, score: 8.87. (276 aa)    
Predicted Functional Partners:
EEF67232.1
Rhodanese-like protein; KEGG: reh:H16_A0333 2.7e-12 rhodanese-related sulfurtransferase.
  
 0.922
EEF68830.1
Hypothetical protein; KEGG: bba:Bd3549 0.0033 rhodanese-related sulfurtransferase K01069.
  
 0.912
EEF68833.1
Hypothetical protein.
  
 0.912
EEF67528.1
KEGG: gsu:GSU0794 1.3e-90 pyridine nucleotide-disulfide oxidoreductase/rhodanese domain protein K00359; Psort location: Cytoplasmic, score: 9.98.
 
 
 0.786
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.775
EEF66152.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.773
EEF69506.1
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein; KEGG: pfu:PF0370 4.0e-14 2-hydroxyacid dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.769
EEF66757.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 
 0.768
pdxB
KEGG: hma:rrnAC0362 1.3e-35 serA4; phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.763
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.755
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.