STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66153.1ABC transporter, ATP-binding protein; KEGG: cpe:CPE1579 1.8e-180 probable ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49. (510 aa)    
Predicted Functional Partners:
EEF66154.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_3090 2.3e-08 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.997
EEF66155.1
KEGG: aha:AHA_1905 4.5e-05 L-arabinose ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
EEF69271.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_3090 1.2e-08 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.986
EEF69270.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_3090 3.7e-08 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.984
EEF69268.1
Basic membrane protein.
 
 0.983
EEF66144.1
Basic membrane protein.
 
 0.982
EEF67600.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: reh:H16_A3653 1.2e-29 ABC-type transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
      0.833
EEF65923.1
Sugar-binding domain protein; KEGG: sth:STH773 2.7e-12 ribose ABC transporter ATP-binding protein K02056.
 
  
 0.781
EEF65921.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: msm:MSMEG_4171 2.1e-37 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.748
EEF65922.1
ABC transporter, ATP-binding protein; KEGG: ctc:CTC00861 2.9e-173 mglA; galactoside transport ATP-binding protein mglA K02056; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 
0.729
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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