STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF66054.1Hydrolase, alpha/beta domain protein; KEGG: mma:MM2650 2.7e-19 hydrolase; Psort location: Cytoplasmic, score: 8.87. (252 aa)    
Predicted Functional Partners:
murF
KEGG: tte:TTE2546 3.5e-81 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase K01929; Psort location: Cytoplasmic, score: 9.91.
 
   
 0.957
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.941
EEF68233.1
KEGG: hpa:HPAG1_0538 1.3e-05 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.87.
  
 0.926
EEF67750.1
KEGG: hpa:HPAG1_0538 2.0e-07 acyl carrier protein K01162; Psort location: Cytoplasmic, score: 8.87.
  
 0.926
srfAA
Surfactin synthetase, subunit 1; KEGG: xac:XAC3922 4.3e-57 entF; ATP-dependent serine activating enzyme K02364; Psort location: Cytoplasmic, score: 9.98.
    
 0.919
EEF68237.1
AMP-binding enzyme; KEGG: mav:MAV_3056 2.0e-126 linear gramicidin synthetase subunit D; Psort location: Cytoplasmic, score: 9.96.
  
 0.892
EEF67355.1
Cupin domain protein; KEGG: lpl:lp_2852 6.2e-29 4-carboxymuconolactone decarboxylase (putative) K01607; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.859
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
 
 0.848
EEF67226.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: msu:MS2190 0. eutG; alcohol dehydrogenase IV K00001:K04072; Psort location: Cytoplasmic, score: 9.98; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.846
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; KEGG: bth:BT2419 3.6e-182 putative GMP synthase [glutamine-hydrolyzing] K01951; Psort location: Cytoplasmic, score: 8.87.
   
 0.834
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.