STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65856.1Efflux transporter, RND family, MFP subunit; KEGG: ptr:470307 1.0e-07 ROCK2, LOC470307; Rho-associated, coiled-coil containing protein kinase 2 K04514; Psort location: Extracellular, score: 7.62; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (569 aa)    
Predicted Functional Partners:
EEF68421.1
RND transporter, HAE1/HME family, permease protein; KEGG: eci:UTI89_C2351 1.4e-71 yegO; hypothetical protein YegO K07789; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.996
EEF65855.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 4.0e-57 ATPase K06020; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.994
EEF69363.1
Hypothetical protein; KEGG: mmu:53419 0.0057 Corin; corin; Psort location: Cytoplasmic, score: 8.87.
  
 0.993
macB
ABC transporter, ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.989
EEF67027.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.2e-46 ATPase K06020; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
 0.974
EEF66769.1
ABC transporter, permease protein; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.953
EEF67026.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0988 3.3e-62 ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.939
EEF65727.1
KEGG: pen:PSEEN3665 0.0013 efflux ABC transporter, ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.935
EEF65695.1
Hypothetical protein.
  
 
 0.935
EEF68799.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.916
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.