STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65867.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
EEF65865.1
Hypothetical protein.
       0.762
EEF65866.1
Cof-like hydrolase; KEGG: eci:UTI89_C4247 1.0e-19 yidA; hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.762
EEF65868.1
Hypothetical protein.
       0.615
EEF65861.1
KEGG: cpf:CPF_0310 8.2e-137 putative glycolate oxidase, subunit GlcD K00104; Psort location: Cytoplasmic, score: 8.87.
       0.529
etfA
Electron transfer flavoprotein FAD-binding domain protein; KEGG: fnu:FN1424 2.8e-17 acyl-CoA dehydrogenase, short-chain specific K00248; Psort location: Cytoplasmic, score: 8.87.
       0.529
EEF65863.1
Electron transfer flavoprotein domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.529
EEF65864.1
FCD domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.529
EEF65859.1
Putative DNA-binding transcriptional regulator CueR; KEGG: vfi:VFA0114 0.0041 methyltransferase K00599; Psort location: Cytoplasmic, score: 8.87.
       0.436
EEF65860.1
Hypothetical protein.
       0.436
EEF65869.1
Hypothetical protein.
       0.409
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.