STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65852.1KEGG: sth:STH1782 9.9e-109 sugar ABC transportor ATP-binding protein K05816; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily. (363 aa)    
Predicted Functional Partners:
EEF67773.1
ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 0.0011 molybdenum ABC transporter ModB K06022; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
EEF65845.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.994
EEF65846.1
KEGG: ava:Ava_0243 4.8e-05 molybdate ABC transporter, permease protein K02018; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
EEF67774.1
ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.993
EEF67775.1
ABC transporter, solute-binding protein; KEGG: eci:UTI89_C1581 4.7e-10 ycjN; putative ABC transporter periplasmic binding protein YcjN precursor K02027; Psort location: CytoplasmicMembrane, score: 9.75.
 
 0.987
EEF65981.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.977
EEF65847.1
ABC transporter, solute-binding protein.
 
 0.976
EEF67675.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.970
EEF67562.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.970
EEF66999.1
ABC transporter, solute-binding protein.
  
 0.970
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.