STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65837.1Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein; KEGG: cpf:CPF_0084 3.5e-200 iolD; myo-inositol catabolism protein IolD K03336; Psort location: Cytoplasmic, score: 8.87; Belongs to the TPP enzyme family. (641 aa)    
Predicted Functional Partners:
iolE
AP endonuclease, family 2; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).
 
 0.998
EEF68320.1
Myo-inositol catabolism protein IolB.
 
 
 0.994
EEF65835.1
Oxidoreductase, NAD-binding domain protein; KEGG: hso:HS_1576 8.6e-110 iolG; dehydrogenase K00010; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.986
EEF65834.1
KEGG: mhj:MHJ_0219 4.3e-115 putative methylmalonate-semialdehyde dehydrogenase K00140; Psort location: Cytoplasmic, score: 9.98.
  
 0.976
EEF65886.1
AP endonuclease, family 2; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.928
EEF69711.1
AP endonuclease, family 2; KEGG: sat:SYN_01340 9.1e-13 endonuclease IV K01151; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.917
EEF68575.1
AP endonuclease, family 2; KEGG: ret:RHE_CH03366 0.00023 putative hydroxypyruvate isomerase protein K01816; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.917
EEF69137.1
Oxidoreductase, NAD-binding domain protein; KEGG: bur:Bcep18194_A4693 3.6e-24 oxidoreductase K00010; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.820
EEF65783.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_2604 3.5e-58 oxidoreductase; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.817
EEF65839.1
Transcriptional regulator, DeoR family.
  
  
 0.805
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.