STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65828.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
EEF65827.1
Glycosyl hydrolase, family 1; KEGG: lmo:lmo0917 5.3e-126 similar to beta-glucosidase K01188; Psort location: Cytoplasmic, score: 9.98; Belongs to the glycosyl hydrolase 1 family.
       0.773
EEF65825.1
Glycosyl hydrolase, family 1; KEGG: ecp:ECP_2895 5.3e-126 6-phospho-beta-glucosidase BglA K01223; Psort location: Cytoplasmic, score: 9.98; Belongs to the glycosyl hydrolase 1 family.
       0.762
EEF65826.1
Glycosyl hydrolase, family 1; KEGG: lmf:LMOf2365_0939 4.7e-134 bglH-2; beta-glucosidase K01188; Psort location: Cytoplasmic, score: 9.98; Belongs to the glycosyl hydrolase 1 family.
       0.762
EEF65824.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.642
EEF65829.1
PRD domain protein; KEGG: spb:M28_Spy1064 2.3e-12 PTS system, mannitol (cryptic)-specific IIA component K00890; Psort location: Cytoplasmic, score: 8.87.
       0.559
EEF65830.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: cca:CCA00348 9.6e-08 ptsN_1; PTS system,IIA component K02806; Psort location: Cytoplasmic, score: 8.87.
       0.559
EEF65821.1
KEGG: lmo:lmo0916 2.6e-14 PTS system, cellobiose-specific IIA component, putative K02759; Psort location: Cytoplasmic, score: 8.87.
       0.448
EEF65822.1
PTS system, lactose/cellobiose family IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
       0.448
EEF65823.1
KEGG: sth:STH951 2.5e-16 PTS system cellobiose-specific IIB component K02760; Psort location: Cytoplasmic, score: 8.87.
       0.448
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.