STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65793.1Putative esterase; KEGG: cgb:cg1170 0.00018 cmt5; corynomycolyl transferase; Psort location: Cytoplasmic, score: 8.87. (251 aa)    
Predicted Functional Partners:
EEF65794.1
Hypothetical protein; KEGG: lil:LA1488 4.2e-06 L-lactate dehydrogenase K00016; Psort location: Cytoplasmic, score: 8.87.
 
     0.952
EEF65791.1
ATP-grasp domain protein; KEGG: bur:Bcep18194_C6870 0.0014 D-alanine--D-alanine ligase K01921; Psort location: Cytoplasmic, score: 8.87.
 
     0.890
EEF65792.1
KEGG: pfu:PF1108 4.4e-19 putative alpha-dextrin endo-1,6-alpha-glucosidase K01200; Psort location: Cytoplasmic, score: 8.87.
 
     0.886
EEF65795.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.773
EEF65802.1
Transglutaminase-like protein.
     
 0.615
EEF65796.1
Twitching motility protein; KEGG: pen:PSEEN2333 3.8e-19 xcpR-2; type II secretion pathway protein E K01509; Psort location: Cytoplasmic, score: 9.98.
       0.584
EEF65797.1
Hypothetical protein.
       0.584
EEF65798.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.584
EEF65799.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.584
EEF65800.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.584
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.