STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EEF65771.1Glyoxalase family protein; KEGG: fnu:FN0356 1.3e-37 lactoylglutathione lyase K01759; Psort location: Cytoplasmic, score: 8.87. (123 aa)    
Predicted Functional Partners:
nifJ
KEGG: fnu:FN1170 0. pyruvate-flavodoxin oxidoreductase K03737.
  
 
 0.970
EEF66086.1
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; KEGG: tma:TM0015 1.2e-20 pyruvate ferredoxin oxidoreductase, gamma subunit K00172; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.903
EEF65651.1
CBS domain protein; KEGG: ctc:CTC01649 5.2e-103 putative manganese-dependent inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 8.87.
    
 0.897
EEF66041.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 6.9e-22 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.863
EEF66042.1
Rieske [2Fe-2S] domain protein; KEGG: bce:BC0399 1.4e-23 oxidoreductase.
  
 
 0.863
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.839
EEF69758.1
Tat pathway signal sequence domain protein; KEGG: cno:NT01CX_0497 1.4e-05 pflC; pyruvate formate-lyase K00538.
  
 
 0.825
EEF66756.1
KEGG: deh:cbdb_A762 2.7e-26 metallo-beta-lactamase family protein K01069; Psort location: Cytoplasmic, score: 8.87.
  
 0.821
EEF67211.1
4Fe-4S binding domain protein; KEGG: mka:MK0930 1.2e-06 coenzyme F420-reducing hydrogenase, gamma subunit K00439; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.818
EEF69594.1
4Fe-4S binding domain protein; KEGG: dvu:DVU1944 1.7e-08 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative K00176; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.816
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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