STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65614.1Hypothetical protein; KEGG: bcl:ABC3815 2.7e-12 tyrosine-protein kinase K00903; Psort location: CytoplasmicMembrane, score: 9.82. (126 aa)    
Predicted Functional Partners:
EEF68136.1
Chain length determinant protein; KEGG: ava:Ava_4846 4.5e-18 lipopolysaccharide biosynthesis K00903; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.976
EEF67839.1
Chain length determinant protein; KEGG: rxy:Rxyl_0560 6.3e-17 protein-tyrosine kinase K08252; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.976
EEF66613.1
Chain length determinant protein; KEGG: rxy:Rxyl_0560 3.0e-17 protein-tyrosine kinase K08252; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.976
EEF67836.1
Bacterial sugar transferase; KEGG: noc:Noc_1508 3.4e-44 undecaprenyl-phosphate galactosephosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.945
EEF68089.1
Polysaccharide biosynthesis protein; KEGG: lsl:LSL_0995 2.6e-204 UDP-N-acetylglucosamine 4,6-dehydratase / UDP-D-quinovosamine 4-dehydrogenase K00100:K01726; Psort location: CytoplasmicMembrane, score: 7.63.
  
 
 0.893
EEF68091.1
Bacterial sugar transferase; KEGG: cph:Cpha266_1830 6.8e-30 undecaprenyl-phosphate galactose phosphotransferase K00996; Psort location: CytoplasmicMembrane, score: 9.49.
  
 
 0.892
EEF66565.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: fth:FTH_1394 4.2e-46 sugar transferase family protein K01005; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.892
EEF65615.1
Hypothetical protein; KEGG: pha:PSHAa1779 2.1e-10 capC; capsular polysaccharide biosynthesis, CapC K01104.
  
  
 0.889
EEF68137.1
Hypothetical protein; KEGG: bsu:BG12508 1.3e-17 ywqD; similar to capsular polysaccharide biosynthesis protein K00903; Psort location: Cytoplasmic, score: 8.87.
 
     0.821
EEF66614.1
KEGG: rxy:Rxyl_1943 1.3e-19 protein-tyrosine kinase K08252; Psort location: CytoplasmicMembrane, score: 9.49.
 
     0.820
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.