STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEF65603.1Hypothetical protein. (58 aa)    
Predicted Functional Partners:
EEF66562.1
Phage replisome organizer N-terminal domain protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.976
EEF68678.1
Phage replisome organizer N-terminal domain protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.975
EEF65604.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 2.1e-42 replicative DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.964
EEF65605.1
Hypothetical protein.
 
     0.951
EEF65602.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 1.6e-44 replicative DNA helicase K01529; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.848
EEF68722.1
Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.804
EEF68676.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.804
EEF66559.1
Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.804
EEF68721.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.795
EEF66558.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.795
Your Current Organism:
Holdemania filiformis
NCBI taxonomy Id: 545696
Other names: H. filiformis DSM 12042, Holdemania filiformis DSM 12042, Holdemania filiformis str. DSM 12042, Holdemania filiformis strain DSM 12042
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.