Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY29792.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (121 aa)    
Predicted Functional Partners:
EKY29793.1
DNA-binding helix-turn-helix protein; KEGG: eba:ebA2762 0.0030 boxR; anaerobic benzoate catabolism transcriptional regulator; K00891 shikimate kinase; Psort location: Cytoplasmic, score: 7.50.
       0.825
EKY29794.1
Peptidase, S8/S53 family; KEGG: cpf:CPF_2369 4.6e-108 subtilase family protein K01362; Psort location: Extracellular, score: 9.72; Belongs to the peptidase S8 family.
       0.576
EKY29791.1
Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.558
EKY29795.1
Peptidoglycan binding domain protein; KEGG: cth:Cthe_2387 0.00099 Gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I. Metallo peptidase. MEROPS family M14C K01308; Psort location: Cytoplasmic, score: 7.50.
       0.506
EKY29790.1
Hypothetical protein.
       0.449
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.402
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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