Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY29684.1Hypothetical protein; KEGG: ssp:SSP0124 9.6e-05 putative phosphotransferase system IIA component; K02755 PTS system, beta-glucosides-specific IIA component; Psort location: Cytoplasmic, score: 7.50. (142 aa)    
Predicted Functional Partners:
EKY29685.1
Secondary thiamine-phosphate synthase enzyme; KEGG: bao:BAMF_2926 5.7e-39 yrpB; putative anionic nitroalkane dioxygenase; Psort location: Cytoplasmic, score: 7.50.
       0.613
EKY29683.1
KEGG: bao:BAMF_0532 9.0e-57 ydiF; putative ABC transporter ATP-binding YdiF; Psort location: Cytoplasmic, score: 9.97.
       0.408
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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