STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29688.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55. (70 aa)    
Predicted Functional Partners:
EKY29687.1
Helicase protein; KEGG: dat:HRM2_39670 8.8e-240 recQ1; RecQ1; Psort location: CytoplasmicMembrane, score: 8.16.
       0.737
EKY29686.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.661
EKY29689.1
F5/8 type C domain protein; KEGG: snc:HMPREF0837_11897 1.6e-130 putative alpha-L-fucosidase; Psort location: Cellwall, score: 9.20.
       0.473
EKY29685.1
Secondary thiamine-phosphate synthase enzyme; KEGG: bao:BAMF_2926 5.7e-39 yrpB; putative anionic nitroalkane dioxygenase; Psort location: Cytoplasmic, score: 7.50.
       0.418
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.