STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29690.1FAD dependent oxidoreductase; KEGG: ana:alr2064 1.0e-57 hypothetical protein; K09835 carotenoid isomerase; Psort location: Cytoplasmic, score: 7.50. (617 aa)    
Predicted Functional Partners:
EKY23553.1
Hypothetical protein; KEGG: mcu:HMPREF0573_11599 5.4e-08 pphA; Ser/Thr and Tyr protein phosphatase (dual specificity); Psort location: CytoplasmicMembrane, score: 9.35.
  
 
 0.786
EKY29691.1
KEGG: bao:BAMF_3184 2.0e-75 RBAM_030540; putative multidrug ABC transporter, ATPase; Psort location: CytoplasmicMembrane, score: 8.78.
       0.757
EKY29692.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 9.35.
       0.712
EKY29693.1
ABC-2 type transporter; KEGG: phu:Phum_PHUM026790 0.00021 ABC transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.707
EKY26250.1
Hypothetical protein; KEGG: sam:MW2482 1.5e-17 crtN; squalene synthase; K10209 dehydrosqualene desaturase.
  
     0.532
EKY29694.1
Putative dGTPase; KEGG: str:Sterm_3961 6.8e-91 deoxyguanosinetriphosphate triphosphohydrolase K01129; Psort location: Cytoplasmic, score: 7.50.
       0.527
EKY23259.1
Polyprenyl synthetase; KEGG: lmc:Lm4b_02608 1.2e-84 heptaprenyl diphosphate synthase component II; K00805 heptaprenyl diphosphate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the FPP/GGPP synthase family.
 
 
 0.475
EKY23254.1
KEGG: toc:Toce_1348 5.4e-82 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UbiA prenyltransferase family.
  
 
 0.462
EKY29689.1
F5/8 type C domain protein; KEGG: snc:HMPREF0837_11897 1.6e-130 putative alpha-L-fucosidase; Psort location: Cellwall, score: 9.20.
       0.458
EKY22075.1
Methyltransferase domain protein; KEGG: mma:MM_1949 1.4e-17 methyltransferase; K00599; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.456
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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