STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29629.1Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 1.7e-15 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 8.78. (240 aa)    
Predicted Functional Partners:
EKY29630.1
Hypothetical protein; KEGG: toc:Toce_2272 0.0029 radical SAM domain protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 7.50.
       0.783
EKY29628.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
    0.607
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.501
EKY27427.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 1.1e-86 multi-sensor hybrid histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
   
 
 0.495
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
  
    0.477
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
     
 0.438
EKY29631.1
Cysteine desulfurase family protein; KEGG: clj:CLJU_c27730 1.2e-118 selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97.
       0.433
EKY29632.1
Hypothetical protein.
       0.416
EKY29624.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.