Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY29630.1Hypothetical protein; KEGG: toc:Toce_2272 0.0029 radical SAM domain protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 7.50. (79 aa)    
Predicted Functional Partners:
EKY29629.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 1.7e-15 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 8.78.
       0.780
EKY29628.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.566
EKY29631.1
Cysteine desulfurase family protein; KEGG: clj:CLJU_c27730 1.2e-118 selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97.
       0.509
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.477
rpsR
Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.
       0.445
EKY29632.1
Hypothetical protein.
       0.406
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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