Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EKY25607.1 | EKY29632.1 | HMPREF0216_02427 | HMPREF0216_00124 | Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. | Hypothetical protein. | 0.497 |
| EKY26662.1 | EKY26996.1 | HMPREF0216_01847 | HMPREF0216_01599 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.592 |
| EKY26662.1 | EKY27024.1 | HMPREF0216_01847 | HMPREF0216_01627 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | 0.829 |
| EKY26662.1 | EKY29326.1 | HMPREF0216_01847 | HMPREF0216_00294 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | 0.667 |
| EKY26662.1 | EKY29632.1 | HMPREF0216_01847 | HMPREF0216_00124 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Hypothetical protein. | 0.426 |
| EKY26662.1 | EKY29633.1 | HMPREF0216_01847 | HMPREF0216_00125 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | Putative sporulation protein YyaC. | 0.510 |
| EKY26662.1 | gpr | HMPREF0216_01847 | HMPREF0216_03117 | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.635 |
| EKY26996.1 | EKY26662.1 | HMPREF0216_01599 | HMPREF0216_01847 | Hypothetical protein. | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.592 |
| EKY26996.1 | EKY27024.1 | HMPREF0216_01599 | HMPREF0216_01627 | Hypothetical protein. | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | 0.481 |
| EKY26996.1 | EKY29632.1 | HMPREF0216_01599 | HMPREF0216_00124 | Hypothetical protein. | Hypothetical protein. | 0.404 |
| EKY27024.1 | EKY26662.1 | HMPREF0216_01627 | HMPREF0216_01847 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.829 |
| EKY27024.1 | EKY26996.1 | HMPREF0216_01627 | HMPREF0216_01599 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.481 |
| EKY27024.1 | EKY29326.1 | HMPREF0216_01627 | HMPREF0216_00294 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | 0.623 |
| EKY27024.1 | EKY29632.1 | HMPREF0216_01627 | HMPREF0216_00124 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.474 |
| EKY27024.1 | EKY29633.1 | HMPREF0216_01627 | HMPREF0216_00125 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | Putative sporulation protein YyaC. | 0.754 |
| EKY27024.1 | gpr | HMPREF0216_01627 | HMPREF0216_03117 | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. | 0.638 |
| EKY29326.1 | EKY26662.1 | HMPREF0216_00294 | HMPREF0216_01847 | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | sigma-E processing peptidase SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.667 |
| EKY29326.1 | EKY27024.1 | HMPREF0216_00294 | HMPREF0216_01627 | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | Stage II sporulation protein M; Psort location: CytoplasmicMembrane, score: 10.00. | 0.623 |
| EKY29326.1 | EKY29632.1 | HMPREF0216_00294 | HMPREF0216_00124 | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein. | 0.468 |
| EKY29326.1 | EKY29633.1 | HMPREF0216_00294 | HMPREF0216_00125 | pro-sigmaK processing inhibitor BofA; Psort location: CytoplasmicMembrane, score: 10.00. | Putative sporulation protein YyaC. | 0.407 |
page 1 of 3