STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29636.1Putative sporulation initiation inhibitor protein Soj; KEGG: apb:SAR116_1648 1.7e-46 chromosome partitioning protein ParA K03496; Psort location: CytoplasmicMembrane, score: 8.78. (206 aa)    
Predicted Functional Partners:
EKY29635.1
Putative stage 0 sporulation protein J; KEGG: hhe:HH0423 4.9e-49 parB; transcriptional regulator involved in chromosome partitioning ParB K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
 
 
 0.982
EKY29637.1
Putative nucleoid occlusion protein; KEGG: hhe:HH0423 1.7e-37 parB; transcriptional regulator involved in chromosome partitioning ParB K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
 
 
 0.957
EKY28089.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.774
dnaA
Replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.710
EKY27153.1
Putative stage III sporulation protein E; KEGG: pen:PSEEN2212 6.3e-104 ftsK; cell division protein FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.566
EKY26587.1
FtsK/SpoIIIE family protein; KEGG: eci:UTI89_C0905 6.3e-11 ftsK; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 8.78.
  
  
 0.552
EKY24420.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.515
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.508
EKY29634.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.503
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.445
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.