Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY29557.1Hypothetical protein; KEGG: sds:SDEG_0334 2.3e-58 alpha/beta hydrolase K06889. (319 aa)    
Predicted Functional Partners:
EKY22237.1
Condensation domain protein; KEGG: ppy:PPE_00083 2.2e-20 bacitracin synthetase 3; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.635
EKY29556.1
Asparagine synthase; KEGG: str:Sterm_0374 1.5e-212 asparagine synthase (glutamine-hydrolyzing) K01953; Psort location: Cytoplasmic, score: 7.50.
       0.447
EKY29065.1
Glycosyltransferase, group 1 family protein; KEGG: bao:BAMF_3284 5.8e-46 epsF; glycogen synthase starch [bacterial glycogen] synthase; Psort location: Cytoplasmic, score: 7.50.
  
 
   0.437
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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