STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY29561.1KEGG: lsp:Bsph_2454 1.8e-147 ABC transporter ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00. (606 aa)    
Predicted Functional Partners:
EKY29562.1
KEGG: aai:AARI_31150 8.1e-111 putative ABC transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.885
EKY29563.1
Transcriptional regulator, MarR family; KEGG: sto:ST0467 0.0035 DNA replication licensing factor; K10726 replicative DNA helicase Mcm; Psort location: Cytoplasmic, score: 7.50.
       0.790
EKY28753.1
KEGG: bde:BDP_0153 6.1e-151 ABC-type transporter, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.539
EKY25767.1
ABC transporter, ATP-binding protein.
 
 
 
0.537
EKY22057.1
KEGG: bde:BDP_1654 5.9e-140 ATP-binding protein of ABC transporter system; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.524
EKY22070.1
Low molecular weight phosphotyrosine protein phosphatase; KEGG: cbe:Cbei_2111 6.3e-56 protein tyrosine phosphatase; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 7.50; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
   
   0.463
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.456
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
 
  
   0.456
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.445
EKY23308.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC01178 1.1e-209 NADH oxidase K00356; Psort location: Cytoplasmic, score: 9.67.
   
 
 0.444
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.