Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY29565.1Hypothetical protein; KEGG: pjd:Pjdr2_0747 0.00030 alpha-galactosidase. (106 aa)    
Predicted Functional Partners:
EKY29564.1
F5/8 type C domain protein; KEGG: pjd:Pjdr2_0747 3.0e-77 alpha-galactosidase; Psort location: Extracellular, score: 8.42.
       0.773
EKY25748.1
Ser/Thr phosphatase family protein.
    
 0.571
EKY29566.1
Hypothetical protein.
       0.453
EKY29561.1
KEGG: lsp:Bsph_2454 1.8e-147 ABC transporter ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
       0.435
EKY29562.1
KEGG: aai:AARI_31150 8.1e-111 putative ABC transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
       0.435
EKY29563.1
Transcriptional regulator, MarR family; KEGG: sto:ST0467 0.0035 DNA replication licensing factor; K10726 replicative DNA helicase Mcm; Psort location: Cytoplasmic, score: 7.50.
       0.435
EKY26192.1
LPXTG-motif protein cell wall anchor domain protein; Belongs to the 5'-nucleotidase family.
    
 0.424
EKY25087.1
Hypothetical protein.
  
 0.424
EKY24467.1
KEGG: cla:Cla_0918 0.0016 ABC transporter, ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
   
 0.420
EKY23531.1
Hypothetical protein; KEGG: bde:BDP_1701 2.0e-13 bbgIII; beta-galactosidase BbgIII.
     
  0.410
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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